Mint,
Yes, I realize that I need clearance.
Basically by the time the arrow was flying correctly, there was no point in the second nock point, had over 3/16 in clearance on the nock.
So I just removed it.
After I fine tuned the location of the upper nock I tried moving the lower nock back up, as soon as it got to around 3/16 or a little less it made the arrows fly nock low.
This is a fairly short bow, at 56 in, but I use a double nock on two other bows that are 54 and 52 in long with no issue.
Most bows I have owned tune up very similar to each other, but this one had that one little strangeness!
I do appreciate all the info on this forum, it has been very helpful!