Stoneknife:
If your staining under your crown dip, that is the problem. The Krylon spray you are using for the crown is a lacquer which uses a very hot solvent. That is cutting into the stain,then the Duco cement which is also a lacquer base is cutting into both bringing the color up from underneath, even if you over coat with something else it will cut through. Stain only that part of the shaft that will not be crowndipped. Regardless of how long you allow those shafts to dry you will still have the problem.
The Oil base varnish is not the problem. dnovo: Is correct in his statement, however you don't have to use all Bohning products to achieve compatability. Just don't use products with hot solvents over water or oil base products.
Try this, stain only the part of the shaft that will not have a crown dip, Then spray two, to three coats of your Krylon on the crown. Crest with waterbased paint and dip just the stained and crested part of the shaft with your oil based clear. Fletch directly to the krylon with Duco. Everything will be compatable.
Bob