About the only thing we agree on is the the arrow nock is higher than the shelf, but we don't seem to measure it in the same way. Some folks nock under the nock point, others above it. So a statement of nock point height isn't a very helpful measurement/descriptor unless we know where the arrow is nocked in relation to the nock point, above it or below it. It remains confusing if two nock points are used because we then don't know which one is being referenced when nock height is stated, the top nock point or the lower nock point.
Probably the best way to go about it is to state how high above the shelf the lower end/bottom of the arrow nock should be when on the string, as some have suggested above. With that measurement, folks can affix the nockpoint(s) on the string appropriately.